Scale-dependent irreversibility in living active matter
T. H. Tan*, G. A. Watson*, Y. Chen*, T. R. Gingrich, J. M. Horowitz, N. Fakhri
arXiv:2107.05701
Symmetry, thermodynamics, and topology in active matter
M. J. Bowick, N. Fakhri, M. C. Marchetti, S. Ramasawamy
arXiv:2107.00724
Development drives dynamics of living chiral crystals
T. H. Tan*, A. Mietke*, H. Higinbotham, J. Li, Y. Chen, P. J. Foster, S. Gokhale, J. Dunkel, N. Fakhri
arXiv:2105.07507
Topological braiding and virtual particles on the cell membrane
J. Liu, J. F. Totz, P. W. Miller, A. D. Hastewell, Y. Chao, J. Dunkel, N. Fakhri
PNAS 2021
A hierarchy of protein patterns robustly decodes cell shape information
M. C. Wigbers*, T. H. Tan*, F. Brauns, J. Liu, S. Z. Swartz, E. Frey, N. Fakhri
Nature Physics 2021
Topological turbulence in the membrane of a living cell
T. H. Tan*, J. Liu*, P. W. Miller*, M. Tekant, J. Dunkel, N. Fakhri
Nature Physics 2020
Cover: June Issue
Nature Research Highlights: How a starfish egg is like a quantum system
Quantifying dissipation using fluctuating currents
J. Li, J. M. Horowitz, T. R. Gingrich, N. Fakhri
Nature Communications 2019 (also: arXiv:1809.02118)
The science of living matter for tomorrow
G. Bauer, N. Fakhri, A. Kicheva, J. Kondev, K. Kruse, H. Noji, D. Riveline, T. E. Saunders, M. Thattai, E. Wieschaus.
Cell Systems 2018
Self-organization of stress patterns drives state transitions in actin cortices
T. H. Tan*, M. M. Garbi*, E. Abu-Shah*, J. Li, A. Sharma, F. C. MacKintosh, K. Keren, C. F. Schmidt, N. Fakhri
Science Advances 2018 (also: arXiv:1603.07600)
Broken detailed balance of filament dynamics in active networks
J. Gladrow, N. Fakhri, F. C. MacKintosh, C. F. Schmidt, C. P. Broedersz
Physical Review Letters 2016 (also: arXiv:1603.04783)
Broken detailed balance at mesoscopic scales in active biological systems
C. Battle*, C. P. Broedersz*, N. Fakhri*, V. F. Geyer, J. Howard, C. F. Schmidt, F. C. MacKintosh (* equal contribution)
Science 2016
Perspective: A fresh eye on nonequilibrium systems
Vinculin is required for cell polarization, migration, and extracellular matrix remodeling in 3D collagen
I. Thievessen, N. Fakhri, J. Steinwachs, V. Kraus, R. S. McIsaac, L. Gao, B. Chen, M. A. Baird, M. W. Davidson, E. Betzig, R. Oldenbourg, C. M. Waterman, B. Fabry
The FASEB Journal 2015
Drebrin-like protein DBN-1 is a sarcomere component that stabilizes actin filaments during muscle contraction
E. Butkevich, K. Bodensiek, N. Fakhri, K. Roden, I. A. T. Schaap, I. Majoul, C. F. Schmidt, D. R. Klopfenstein
Nature Communications 2015
High resolution mapping of intracellular fluctuations using carbon nanotubes
N. Fakhri, A. D. Wessel, C. Willms, M. Pasquali, D. Klopfenstein, F. C. MacKintosh, C. F. Schmidt
Science 2014
A surprising twist
N. Fakhri, C. F. Schmidt
eLife 2014
Axial thermal rotation of slender rods
D. Li, N. Fakhri, M. Pasquali, S. L. Biswal
Physical Review Letters 2011
Brownian motion of stiff filaments in a crowded environment
N. Fakhri, F. C. MacKintosh, B. Lounis, L. Cognet, M. Pasquali
Science 2010
Do inner shells of double-walled carbon nanotubes fluoresce?
D. A. Tsyboulski, Y. Hou, N. Fakhri, S. Ghosh, R. Zhang, S. M. Bachilo, M. Pasquali, L. Chen, J. Liu, R. B. Weisman
Nano Letters 2009
Diameter-dependent bending dynamics of single-walled carbon nanotubes in liquids
N. Fakhri, D. A. Tsyboulski, L. Cognet, R. B. Weisman, M. Pasquali
PNAS 2009
Self-assembly of ordered nanowires in biological suspensions of single- walled carbon nanotubes
E. K. Hobbie, J. A. Fagan, M. L. Becker, S. D. Hudson, N. Fakhri, M. Pasquali
ACS Nano 2009
T. H. Tan*, G. A. Watson*, Y. Chen*, T. R. Gingrich, J. M. Horowitz, N. Fakhri
arXiv:2107.05701
Symmetry, thermodynamics, and topology in active matter
M. J. Bowick, N. Fakhri, M. C. Marchetti, S. Ramasawamy
arXiv:2107.00724
Development drives dynamics of living chiral crystals
T. H. Tan*, A. Mietke*, H. Higinbotham, J. Li, Y. Chen, P. J. Foster, S. Gokhale, J. Dunkel, N. Fakhri
arXiv:2105.07507
Topological braiding and virtual particles on the cell membrane
J. Liu, J. F. Totz, P. W. Miller, A. D. Hastewell, Y. Chao, J. Dunkel, N. Fakhri
PNAS 2021
A hierarchy of protein patterns robustly decodes cell shape information
M. C. Wigbers*, T. H. Tan*, F. Brauns, J. Liu, S. Z. Swartz, E. Frey, N. Fakhri
Nature Physics 2021
Topological turbulence in the membrane of a living cell
T. H. Tan*, J. Liu*, P. W. Miller*, M. Tekant, J. Dunkel, N. Fakhri
Nature Physics 2020
Cover: June Issue
Nature Research Highlights: How a starfish egg is like a quantum system
Quantifying dissipation using fluctuating currents
J. Li, J. M. Horowitz, T. R. Gingrich, N. Fakhri
Nature Communications 2019 (also: arXiv:1809.02118)
The science of living matter for tomorrow
G. Bauer, N. Fakhri, A. Kicheva, J. Kondev, K. Kruse, H. Noji, D. Riveline, T. E. Saunders, M. Thattai, E. Wieschaus.
Cell Systems 2018
Self-organization of stress patterns drives state transitions in actin cortices
T. H. Tan*, M. M. Garbi*, E. Abu-Shah*, J. Li, A. Sharma, F. C. MacKintosh, K. Keren, C. F. Schmidt, N. Fakhri
Science Advances 2018 (also: arXiv:1603.07600)
Broken detailed balance of filament dynamics in active networks
J. Gladrow, N. Fakhri, F. C. MacKintosh, C. F. Schmidt, C. P. Broedersz
Physical Review Letters 2016 (also: arXiv:1603.04783)
Broken detailed balance at mesoscopic scales in active biological systems
C. Battle*, C. P. Broedersz*, N. Fakhri*, V. F. Geyer, J. Howard, C. F. Schmidt, F. C. MacKintosh (* equal contribution)
Science 2016
Perspective: A fresh eye on nonequilibrium systems
Vinculin is required for cell polarization, migration, and extracellular matrix remodeling in 3D collagen
I. Thievessen, N. Fakhri, J. Steinwachs, V. Kraus, R. S. McIsaac, L. Gao, B. Chen, M. A. Baird, M. W. Davidson, E. Betzig, R. Oldenbourg, C. M. Waterman, B. Fabry
The FASEB Journal 2015
Drebrin-like protein DBN-1 is a sarcomere component that stabilizes actin filaments during muscle contraction
E. Butkevich, K. Bodensiek, N. Fakhri, K. Roden, I. A. T. Schaap, I. Majoul, C. F. Schmidt, D. R. Klopfenstein
Nature Communications 2015
High resolution mapping of intracellular fluctuations using carbon nanotubes
N. Fakhri, A. D. Wessel, C. Willms, M. Pasquali, D. Klopfenstein, F. C. MacKintosh, C. F. Schmidt
Science 2014
A surprising twist
N. Fakhri, C. F. Schmidt
eLife 2014
Axial thermal rotation of slender rods
D. Li, N. Fakhri, M. Pasquali, S. L. Biswal
Physical Review Letters 2011
Brownian motion of stiff filaments in a crowded environment
N. Fakhri, F. C. MacKintosh, B. Lounis, L. Cognet, M. Pasquali
Science 2010
Do inner shells of double-walled carbon nanotubes fluoresce?
D. A. Tsyboulski, Y. Hou, N. Fakhri, S. Ghosh, R. Zhang, S. M. Bachilo, M. Pasquali, L. Chen, J. Liu, R. B. Weisman
Nano Letters 2009
Diameter-dependent bending dynamics of single-walled carbon nanotubes in liquids
N. Fakhri, D. A. Tsyboulski, L. Cognet, R. B. Weisman, M. Pasquali
PNAS 2009
Self-assembly of ordered nanowires in biological suspensions of single- walled carbon nanotubes
E. K. Hobbie, J. A. Fagan, M. L. Becker, S. D. Hudson, N. Fakhri, M. Pasquali
ACS Nano 2009